“Avast! Anti-Virus is a robust program that offers a boot-time scan. This is a scan that runs prior to the Operating System fully loading drivers, startup programs, or other places where viruses or trojans can hide from scanners.”
Normally in windows you can del OLD files within windows if the date stamp is older than your system time clock.
Use ccleaner to get rid of all junk files.
The Old trace file related to java cache and if you have removed java can be removed
When I did that clean install, all of the old files were kept. 66 Gigabytes of them.
I did delete all of them after that Trojan was found.
I’m running Windows 7 now, but my computer still has a recovery partition for Vista. Is there anyway that partition could get infected and cause trouble? Should I include it in every scan?