This file ( AgAppLaunch.db ) has also been detected as a rootkit during my first full scan. However, a follow up with VirSCAN.org has not confirmed an infection:
http://virscan.org/report/3d0c316fc7a5e8df6e4c4a003e2115ff.html

I followed up with a boot-time and got two different positive results:
Java:Jade-C [Heur]
PUP: Win32: PUP-gen [PUP]

Both have been moved to chest. Is there anything else I need to do?